<?xml version="1.0" encoding="UTF-8"?>
<SOFTPKG NAME="bioperl-run" VERSION="1,2,2,0">
  <TITLE>bioperl-run</TITLE>
  <ABSTRACT>Bioperl wrapper toolkit</ABSTRACT>
  <AUTHOR>Bioperl Team (bioperl-l@bioperl.org)</AUTHOR>
  <IMPLEMENTATION>
    <OS NAME="MSWin32" />
    <ARCHITECTURE NAME="MSWin32-x86-multi-thread-5.10" />
    <CODEBASE HREF="MSWin32-x86-multi-thread-5.10/bioperl-run-1.2.2.zip" />
    <PROVIDE NAME="Bio::Factory::EMBOSS" />
    <PROVIDE NAME="Bio::Tools::Run::Alignment::Blat" />
    <PROVIDE NAME="Bio::Tools::Run::Alignment::Clustalw" />
    <PROVIDE NAME="Bio::Tools::Run::Alignment::DBA" />
    <PROVIDE NAME="Bio::Tools::Run::Alignment::Lagan" />
    <PROVIDE NAME="Bio::Tools::Run::Alignment::Sim4" />
    <PROVIDE NAME="Bio::Tools::Run::Alignment::StandAloneFasta" />
    <PROVIDE NAME="Bio::Tools::Run::Alignment::TCoffee" />
    <PROVIDE NAME="Bio::Tools::Run::Analysis" />
    <PROVIDE NAME="Bio::Tools::Run::Analysis::Job::soap" />
    <PROVIDE NAME="Bio::Tools::Run::Analysis::soap" />
    <PROVIDE NAME="Bio::Tools::Run::AnalysisFactory" />
    <PROVIDE NAME="Bio::Tools::Run::AnalysisFactory::Pise" />
    <PROVIDE NAME="Bio::Tools::Run::AnalysisFactory::soap" />
    <PROVIDE NAME="Bio::Tools::Run::Coil" />
    <PROVIDE NAME="Bio::Tools::Run::EMBOSSacd" />
    <PROVIDE NAME="Bio::Tools::Run::EMBOSSApplication" />
    <PROVIDE NAME="Bio::Tools::Run::Eponine" />
    <PROVIDE NAME="Bio::Tools::Run::FootPrinter" />
    <PROVIDE NAME="Bio::Tools::Run::Genewise" />
    <PROVIDE NAME="Bio::Tools::Run::Genscan" />
    <PROVIDE NAME="Bio::Tools::Run::Hmmer" />
    <PROVIDE NAME="Bio::Tools::Run::Hmmpfam" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Molphy::ProtML" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::PAML::Codeml" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::PAML::Yn00" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Phylip::Base" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Phylip::Consense" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Phylip::DrawGram" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Phylip::DrawTree" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Phylip::Neighbor" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Phylip::PhylipConf" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Phylip::ProtDist" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Phylip::ProtPars" />
    <PROVIDE NAME="Bio::Tools::Run::Phylo::Phylip::SeqBoot" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::abiview" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::addquart" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::align2model" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::alistat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::antigenic" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::assp" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::backtranseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::bambe" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::banana" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::bionj" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::biosed" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::bl2seq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::blast2" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::blimps" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::blimps_block" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::blimps_matrix" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::boxshade" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::btwisted" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::cai" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::cap" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::cds" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::chaos" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::charge" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::checktrans" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::chips" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::cirdna" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::clique" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::clustalw" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::clustalw_convert" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::codcmp" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::coderet" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::codnocod" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::codontree" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::codonw" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::comalign" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::combat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::compseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::confmat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::cons" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::consense" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::consensus" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::con_filter" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::cpgplot" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::cpgreport" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::CSR" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::cusp" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::cutseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dan" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dca" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::decorate" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::degapseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::descseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dialign2" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::diffseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::digest" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::distmat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::distquart" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dnadist" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dnapars" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dollop" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::domainer" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dotmatcher" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dotpath" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dottup" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::drawgram" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::drawpyr" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::drawtree" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dreg" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::druid" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dsc" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::dssp" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::einverted" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::emma" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::emowse" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::environ" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::eprimer3" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::equicktandem" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::est2genome" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::etandem" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::extractfeat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::extractseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::fasta" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::fastdnaml" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::fastrna" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::filtersites" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::findkm" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::fitch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::fmtseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::freak" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::fuzznuc" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::fuzzpro" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::fuzztran" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::gb2xml" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::geecee" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::genscan" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::getblock" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::getorf" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::gff2ps" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::gibbs" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::gibbs_scan" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::golden" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::grailclnt" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::gruppi" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::helixturnhelix" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmalign" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmbuild" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmcalibrate" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmconvert" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmemit" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmer2sam" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmfetch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmpfam" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmscore" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmmsearch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::hmoment" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::homology" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::html4blast" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::iep" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::infoalign" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::infoseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::interface" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::isochore" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::kitsch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::lassap" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::lgicsearch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::lindna" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::listor" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::loadseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::lvb" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::makehist" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::map" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::marscan" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::maskfeat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::maskseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::matcher" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::megamerger" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::melting" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::merger" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::mfold" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::mix" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::modelfromalign" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::most" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::mreps" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::msa" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::msbar" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::mspcrunch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::mview_alig" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::mview_blast" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::mwfilter" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::needle" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::neighbor" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::newcpgreport" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::newcpgseek" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::newseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::njdist" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::nnssp" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::notseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::nrscope" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::nthseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::octanol" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::oddcomp" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::palindrome" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pam" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::parciquart" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pars" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pasteseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::patmatdb" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::patmatmotifs" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::patser" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pdbsearch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pepcoil" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pepinfo" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pepnet" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pepstats" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pepwheel" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pepwindow" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pepwindowall" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pestfind" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pftools" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::phiblast" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pima" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::plotcon" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::plotorf" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::plsearch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::polydot" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pratt" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::predator" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::preg" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::prettyalign" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::prettyplot" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::prettyseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::primersearch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::primo" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::prodom" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::profit" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::prophecy" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::prophet" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::prose" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::protal2dna" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::protdist" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::protpars" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::prot_nucml" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pscan" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::psiblast" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::psort2" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::Puzzle" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pyramids" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::pyreval" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::qstar" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::quicktree" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::readnexus" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::readseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::recoder" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::redata" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::remap" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::repeats" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::restover" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::restrict" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::revseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::rnadistance" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::rnaeval" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::rnafold" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::rnaga" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::rnaheat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::rnainverse" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::rnapdist" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::rnasubopt" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::sam2hmmer" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::sampleseqs" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::saps" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::satellites" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::scan_for_matches" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::scope" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::scopparse" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::seqboot" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::seqgen" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::seqmatchall" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::seqsblast" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::seqstat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::showalign" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::showfeat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::showorf" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::showseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::shuffleseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::sigcleave" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::siggen" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::sigscan" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::silent" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::sirna" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::splitter" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::sreformat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::stretcher" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::stride" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::stssearch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::supermatcher" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::syco" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::tacg" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::tfscan" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::tipdate" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::tmap" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::toppred" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::tranalign" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::transeq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::treealign" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::trimest" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::trimseq" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::trnascan" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::twofeat" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::unroot" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::vectorstrip" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::water" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::weighbor" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::whichdb" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::wise2" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::wobble" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::wordcount" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::wordmatch" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::wublast2" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::xblast" />
    <PROVIDE NAME="Bio::Tools::Run::PiseApplication::xpound" />
    <PROVIDE NAME="Bio::Tools::Run::PiseJob" />
    <PROVIDE NAME="Bio::Tools::Run::PiseJobParser" />
    <PROVIDE NAME="Bio::Tools::Run::PiseWorkflow" />
    <PROVIDE NAME="Bio::Tools::Run::Primate" />
    <PROVIDE NAME="Bio::Tools::Run::Primer3" />
    <PROVIDE NAME="Bio::Tools::Run::Prints" />
    <PROVIDE NAME="Bio::Tools::Run::Profile" />
    <PROVIDE NAME="Bio::Tools::Run::Promoterwise" />
    <PROVIDE NAME="Bio::Tools::Run::Pseudowise" />
    <PROVIDE NAME="Bio::Tools::Run::RepeatMasker" />
    <PROVIDE NAME="Bio::Tools::Run::Seg" />
    <PROVIDE NAME="Bio::Tools::Run::Signalp" />
    <PROVIDE NAME="Bio::Tools::Run::Tmhmm" />
    <PROVIDE NAME="Bio::Tools::Run::TribeMCL" />
    <PROVIDE NAME="Bio::Tools::Run::Vista" />
  </IMPLEMENTATION>
</SOFTPKG>

