| Bio::Chado::Schema - A standard DBIx::Class layer for the Chado database schema. |
Bio::Chado::Schema
use Bio::Chado::Schema;
my $chado = Bio::Chado::Schema->connect( $dsn, $user, $password );
print "number of rows in feature table: ", $chado->resultset('Sequence::Feature')->count, "\n";
This is a standard object-relational mapping layer for use with the GMOD Chado database schema. This layer is implemented with the DBIx::Class manpage, generated with the help of the very fine the DBIx::Class::Schema::Loader manpage module.
Chado is an open-source modular database schema for biological data. It is divided into several notional "modules", which are reflected in the namespace organization of this package. Note that modules in the Chado context refers to sets of tables, they are not modules in the Perl sense.
To learn how to use this DBIx::Class ORM layer, a good starting point is the the DBIx::Class::Manual manpage.
Bio::Chado::Schema - A standard DBIx::Class layer for the Chado database schema.
the Bio::Chado::Schema::CellLine manpage
the Bio::Chado::Schema::Companalysis manpage
the Bio::Chado::Schema::Composite manpage
the Bio::Chado::Schema::Contact manpage
the Bio::Chado::Schema::Cv manpage
the Bio::Chado::Schema::Expression manpage
the Bio::Chado::Schema::General manpage
the Bio::Chado::Schema::Genetic manpage
the Bio::Chado::Schema::Library manpage
the Bio::Chado::Schema::Mage manpage
the Bio::Chado::Schema::Map manpage
the Bio::Chado::Schema::NaturalDiversity manpage
the Bio::Chado::Schema::Organism manpage
the Bio::Chado::Schema::Phenotype manpage
the Bio::Chado::Schema::Phylogeny manpage
the Bio::Chado::Schema::Project manpage
the Bio::Chado::Schema::Pub manpage
the Bio::Chado::Schema::Sequence manpage
the Bio::Chado::Schema::Stock manpage
Aureliano Bombarely, <ab782@cornell.edu>
Naama Menda, <nm249@cornell.edu>
Jonathan Leto, <leto@cpan.org>
Robert Buels, <rmb32@cornell.edu>
Copyright 2009 Boyce Thompson Institute for Plant Research
This program is free software; you can redistribute it and/or modify it under the same terms as Perl itself.
Robert Buels <rbuels@cpan.org>
This software is copyright (c) 2009 by Robert Buels.
This is free software; you can redistribute it and/or modify it under the same terms as the Perl 5 programming language system itself.
| Bio::Chado::Schema - A standard DBIx::Class layer for the Chado database schema. |